INC ACADEMY

INC Academy is organised by the International Nucleome Consortium (INC) funded by the COST action. Our virtual events are every second Thursday at 5pm CET, 4pm BST, 8am PDT. These include hands-on tutorials, regular webinars, reports from short-term scientific missions and more. The schedule of future events and the list of past events are provided below.

If you want to give a talk, tutorial or short project report, click on the registration button and fill your information to be selected. Thanks in advance for your participation.

September 7- 9, 2022

Poster design by Ragnhild Eskeland, IMB & CanCell, University of Oslo

The 4th Oslo Epigenetics Symposium in Norway

Oslo Science Park, Oslo, Norway

Confirmed speakers: 

Kristian Helin | Kerstin Bystricky | Andrea Musacchio |Pernette Verschure | Yang Shi | Diego Pasini | Arne Klungland | Pierre Chymkowitch | Barbara van Loon | Hilde Nilsen | John Arne Dahl | Jonas Paulsen | Biswajyoti Sahu | Agyris Papantonis | Marija Kundakovic. 

Chairs: 

* Ragnhild Eskeland, Associate Professor, IMB & CanCell, University of Oslo

* Dr. Deo Pandey, Oslo University Hospital

* Nikolina Sekulic, Associate Professor, NCMM, University of Oslo

This symposium is organised by:

* The Centre for Cancer Cell Reprogramming, Norwegian Biochemical Society

* COST European Cooperation in Science & Technology CA18127 International Nucleome Consortium

* CanCell, UiO

The deadline for submission of abstract is 15th of August 2022, registration deadline is 19th of August.

June 16th, 2022
5pm CET, 4pm GMT
Graphic design based on “reconstituted chromatin prepared from 12-mer tandem repeats of a strong nuclear positioning sequence and purified histones.” Photo credit: ‘Grigoryev et al. 2009 Evidence for heteromorphic chromatin fibers from analysis of nucleosome interactions. Proc Natl Acad Sci USA 106:13317-13322’.
Winnok De Vos
University of Antwerp, Belgium
Vulnerability and resilience of the nuclear envelope
Huaiying Zhang
Carnegie Mellon University, Pittsburgh, PA, USA
Phase separation in nuclear organization of ALT cancer cells
June 2nd, 2022
4pm-6pm CET, 3pm-5pm GMT
Graphic design by scisters.editions based on an image from “Confocal micrograph of cultured colon cancer cells showing the nuclei stained with DAPI in blue, the actin cytoskeleton in red and plectin in green. doi:10.7295/W9CIL38917″.

Qi Zhou

Zhejiang University & University of Vienna, Austria

Reconstructing the evolution of ammonite chromosomes and nuclear architecture

Tanja Schwander

Department of Ecology and Evolution, University of Lausanne, Switzerland

“Genomic consequences of asexual reproduction in animals”

Peter Andersen

MBG, Aarhus University, Denmark

“Recurrent innovation of basal genome regulation in Drosophila”

Camille Berthelot

Comparative Functional Genomics, Institut Pasteur, Paris, France

“Tracing the evolution of gene regulation and the emergence of new traits”
June 28 – July 1st, 2022
Graphic design by scisters.editions

Pictures credits: Maxime Torora (Jost Lab) & Silvia Kocanova (Bystricky lab)

SYMPOSIUM & ANNUAL MC MEETING

CBI, Toulouse, France
Nuclear Architecture & Function
Dealine for registration: May 15th, 2022

PAST EVENTS & VIDEOS

WEBINARS

Alonso Javier Pardal

“Import and chaperoning of monomeric histones”

Chirag Nepal

“Transcription of liver cancer alternative promoters in CpG depleted regions is epigenetically regulated”

Leonie Ringrose

“Theoretical and experimental investigation of Z-DNA as an epigenetic switch”

Irene Farabella

“Three-dimensional genome organization via triplex-forming RNAs”

Amith Zafal Abdulla

“Painters in chromatin: a unified framework for the establishment and maintenance of the epigenomic information”

Kristan Piroeva

“Nucleosome repositioning in chronic lymphocytic leukemia”

Liudmila Mikheeva

“The role of insulators and transcription in 3D chromatin organisation of flies”

Guillermo Orsi

“Chromatin contortions to fit into the cricket sperm nucleus”

Jian Ma

“NIH 4DN and the nuclear architecture research in my lab”

Argyris Papantonis

“Spatial genome architecture in development and disease”

Wu Chao-Ting

“Develop, implement, and disseminate imaging, analysis, and modeling tools for elucidating the 3D organization of genomes in their entirety”

Job Dekker

“Effects of cohesin ring opening on chromosome folding”

Jan-Michael Peters

“Does cohesin mediate DNA loop extrusion and sister chromatid cohesion through distinct or related mechanisms?”

Adele Marston

“Chromosome organization in meiosis”

Maria Carmo-Fonseca

“The challenge of measuring splicing kinetics”

Guillaume Andrey

“The regulatory, transcriptional and phenotypical costs of non-coding mutations at the Pitx1 locus”

Luca Fiorillo & Francesco Musella

“Comparison of the Hi-C, GAM and SPRITE methods by using polymer models of chromatin”

Gabriele Girelli

“A journey to the center of the nucleus – developing GPSeq”

Haitham Shaban

“Nanoscale Imaging of chromatin structure and dynamics in Single Living Cells”

Jekaterina Erenpreisa

“Cancer cells reveal scale-free genome regulation by pericentric chromatin domains”

Judith Zaugg

“Predictive Gene Regulatory Network Models to Study Ageing and Disease Mechanisms”

Chris Toseland

“Nanoscale organisation of transcription regulated by nuclear myosins”

Alberto Bueno-Costa

“Epigenetic and Epitranscriptomic changes in leukemic transdifferentiation”

Andréa Willemin

“Context-independent function of a topological boundary in mice”

Annick Lesne

“ShRec3D: combining distance geometry and contact networks for a fast and easy 3D genome reconstruction”

Kiran Kumari

“Computing the spatial organization and dynamics of chromatin domains”

Hossein Salari

“How heterogeneous organization of interphase chromosome leads to local anomalous diffusions”

Rodrigo Villaseñor

“Chromatin meets its proteome – revealing genome function through chromatin proteomics”

Mario Nicodemi

“Polymer phase separation controls chromatin architecture in single-cells”

Maria Cristina Gambetta

“Molecular basis of gene insulation in Drosophila”

Gesa Loof

“Specific 3D genome topologies distinguish epiblast and primitive endoderm in the early embryo”

Michał Kadlof

“Chromatin modelling methods”

Marco Di Stefano

“Epigenomics-based modeling of the Arabidopsis thaliana genome”

Todor Gitchev

“Dynamic modelling of chromosome folding in C. elegans suggests in vivo z-loops formation”

Melita Vidaković

“Epi-cure: Epi-CRISPR targeted DNA methylation of Arx gene as a potential therapeutic strategy in diabetes”

Marc A. Marti Renom

“Chromosome walking with super-resolution imaging and modeling”

TUTORIALS

Jonas Paulsen

“Using Chrom3D to generate 3D genome models”

ANNUAL WG MEETING

December 3, 2020
Presentation of INC working group activities
WG1: Network building and strengthening | slides | video

Communication Team | slides | video

WG2: Challenging the frontiers of experimental resolution | slides | video

WG3: Developing big data analysis and applying 3D modelling tools | slides | video

WG4: Exploit the Nucleome in heatlh and agriculture | slides | video

WG5: Nucleome inspired technology transfer | slides | video

poster gallery

ORGANIZING COMMITTEE
Tuncay Baubec

Maria Cristina Gambetta

Sarah Hurtado-Bagès

Daniel Jost

Vladimir Teif

Melita Vidaković